<?php
/**
* @file classes/citation/CitationDAO.php
*
* Copyright (c) 2014-2021 Simon Fraser University
* Copyright (c) 2000-2021 John Willinsky
* Distributed under the GNU GPL v3. For full terms see the file docs/COPYING.
*
* @class CitationDAO
*
* @ingroup citation
*
* @see Citation
*
* @brief Operations for retrieving and modifying Citation objects
*/
namespace PKP\citation;
use PKP\db\DAOResultFactory;
use PKP\plugins\Hook;
class CitationDAO extends \PKP\db\DAO
{
/**
* Insert a new citation.
*
* @param Citation $citation
*
* @return int the new citation id
*/
public function insertObject($citation)
{
$seq = $citation->getSequence();
if (!(is_numeric($seq) && $seq > 0)) {
// Find the latest sequence number
$result = $this->retrieve(
'SELECT MAX(seq) AS lastseq FROM citations
WHERE publication_id = ?',
[(int)$citation->getData('publicationId')]
);
$row = $result->current();
$citation->setSequence($row ? $row->lastseq + 1 : 1);
}
$this->update(
sprintf('INSERT INTO citations
(publication_id, raw_citation, seq)
VALUES
(?, ?, ?)'),
[
(int) $citation->getData('publicationId'),
$citation->getRawCitation(),
(int) $seq
]
);
$citation->setId($this->getInsertId());
$this->_updateObjectMetadata($citation);
return $citation->getId();
}
/**
* Retrieve a citation by id.
*
* @param int $citationId
*
* @return ?Citation
*/
public function getById($citationId)
{
$result = $this->retrieve(
'SELECT * FROM citations WHERE citation_id = ?',
[$citationId]
);
$row = $result->current();
return $row ? $this->_fromRow((array) $row) : null;
}
/**
* Import citations from a raw citation list of the particular publication.
*
* @param int $publicationId
* @param string $rawCitationList
*/
public function importCitations($publicationId, $rawCitationList)
{
assert(is_numeric($publicationId));
$publicationId = (int) $publicationId;
$existingCitations = $this->getByPublicationId($publicationId)->toAssociativeArray();
// Remove existing citations.
$this->deleteByPublicationId($publicationId);
// Tokenize raw citations
$citationTokenizer = new CitationListTokenizerFilter();
$citationStrings = $citationTokenizer->execute($rawCitationList);
// Instantiate and persist citations
$importedCitations = [];
if (is_array($citationStrings)) {
foreach ($citationStrings as $seq => $citationString) {
if (!empty(trim($citationString))) {
$citation = new Citation($citationString);
// Set the publication
$citation->setData('publicationId', $publicationId);
// Set the counter
$citation->setSequence($seq + 1);
$this->insertObject($citation);
$importedCitations[] = $citation;
}
}
}
Hook::call('CitationDAO::afterImportCitations', [$publicationId, $existingCitations, $importedCitations]);
}
/**
* Retrieve an array of citations matching a particular publication id.
*
* @param int $publicationId
* @param ?\PKP\db\DBResultRange $rangeInfo
*
* @return DAOResultFactory<Citation> containing matching Citations
*/
public function getByPublicationId($publicationId, $rangeInfo = null)
{
$result = $this->retrieveRange(
'SELECT *
FROM citations
WHERE publication_id = ?
ORDER BY seq, citation_id',
[(int)$publicationId],
$rangeInfo
);
return new DAOResultFactory($result, $this, '_fromRow', ['id']);
}
/**
* Update an existing citation.
*
* @param Citation $citation
*/
public function updateObject($citation)
{
$returner = $this->update(
'UPDATE citations
SET publication_id = ?,
raw_citation = ?,
seq = ?
WHERE citation_id = ?',
[
(int) $citation->getData('publicationId'),
$citation->getRawCitation(),
(int) $citation->getSequence(),
(int) $citation->getId()
]
);
$this->_updateObjectMetadata($citation);
}
/**
* Delete a citation.
*
* @param Citation $citation
*
* @return bool
*/
public function deleteObject($citation)
{
return $this->deleteById($citation->getId());
}
/**
* Delete a citation by id.
*
* @param int $citationId
*
* @return bool
*/
public function deleteById($citationId)
{
$this->update('DELETE FROM citation_settings WHERE citation_id = ?', [(int) $citationId]);
return $this->update('DELETE FROM citations WHERE citation_id = ?', [(int) $citationId]);
}
/**
* Delete all citations matching a particular publication id.
*
* @param int $publicationId
*
* @return bool
*/
public function deleteByPublicationId($publicationId)
{
$citations = $this->getByPublicationId($publicationId);
while ($citation = $citations->next()) {
$this->deleteById($citation->getId());
}
return true;
}
//
// Private helper methods
//
/**
* Construct a new citation object.
*
* @return Citation
*/
public function _newDataObject()
{
return new Citation();
}
/**
* Internal function to return a citation object from a
* row.
*
* @param array $row
*
* @return Citation
*/
public function _fromRow($row)
{
$citation = $this->_newDataObject();
$citation->setId((int)$row['citation_id']);
$citation->setData('publicationId', (int)$row['publication_id']);
$citation->setRawCitation($row['raw_citation']);
$citation->setSequence((int)$row['seq']);
$this->getDataObjectSettings('citation_settings', 'citation_id', $row['citation_id'], $citation);
return $citation;
}
/**
* Update the citation meta-data
*
* @param Citation $citation
*/
public function _updateObjectMetadata($citation)
{
$this->updateDataObjectSettings('citation_settings', $citation, ['citation_id' => $citation->getId()]);
}
}
if (!PKP_STRICT_MODE) {
class_alias('\PKP\citation\CitationDAO', '\CitationDAO');
}
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